2x83

X-ray diffraction
1.7Å resolution

Evolutionary basis of HIV restriction by the antiretroviral TRIMCyp

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-109277 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Gag protein Chains: A, C
Molecule details ›
Chains: A, C
Length: 146 amino acids
Theoretical weight: 16.2 KDa
Source organism: Human immunodeficiency virus type 1 lw12.3 isolate
Expression system: Escherichia coli
UniProt:
  • Canonical: E9MJX7 (Residues: 125-270; Coverage: 43%)
Gene name: gag
Sequence domains: gag protein p24 N-terminal domain
Structure domains: Human Immunodeficiency Virus Type 1 Capsid Protein
TRIM5alpha Chains: B, D
Molecule details ›
Chains: B, D
Length: 163 amino acids
Theoretical weight: 17.76 KDa
Source organism: Macaca fascicularis
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: B0ZE32 (Residues: 304-466; Coverage: 35%)
Sequence domains: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Structure domains: Cyclophilin-like

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU FR-E SUPERBRIGHT
Spacegroup: P21
Unit cell:
a: 38.52Å b: 110.15Å c: 67.76Å
α: 90° β: 101.59° γ: 90°
R-values:
R R work R free
0.163 0.158 0.246
Expression systems:
  • Escherichia coli
  • Escherichia coli BL21(DE3)