› 2xfd

X-ray diffraction
1.19Å resolution

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-112851 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
Carbohydrate binding module xylan-binding domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 112 amino acids
Theoretical weight: 11.94 KDa
Source organism: Escherichia coli
UniProt:
  • Canonical: D7GNB4 (Residues: 2-111; Coverage: 99%)
Gene name: cbm60
Sequence domains: Ca-dependent carbohydrate-binding module xylan-binding
Structure domains: Lipoxygenase-1

Ligands and Environments

Carbohydrate polymer : NEW Components: BGC
Carbohydrate polymer
2 bound ligands:
Ligand CA 2 x CA
Ligand GOL 1 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P212121
Unit cell:
a: 29.61Å b: 41.99Å c: 80.08Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.119 0.117 0.148

Quick links

Citations

3 review citations

Advances in understanding the molecular basis of plant cell wall polysaccharide recognition by carbohydrate-binding modules.
Gilbert et al. (2013)
2 more

4 mentions without citation

Convergent and divergent mechanisms of sugar recognition across kingdoms.
Taylor et al. (2014)
3 more