› 2y5p

X-ray diffraction
1.3Å resolution

B-repeat of Listeria monocytogenes InlB (internalin B)

Released:
DOI: 10.2210/pdb2y5p/pdb
PDB entry 2y5p coloured by chain, front view.
PDB entry 2y5p coloured by chain, side view.
PDB entry 2y5p coloured by chain, top view.
Source organism: Listeria monocytogenes EGD
Primary publication:
Fold and function of the InlB B-repeat.
Ebbes M, Bleymüller WM, Cernescu M, Nölker R, Brutschy B, Niemann HH
J Biol Chem 286 15496-506 (2011)
PMID: 21345802

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo tetramer
Assembly name:
PDBe Complex ID:
PDB-CPX-144108 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Internalin B Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 74 amino acids
Theoretical weight: 8.3 KDa
Source organism: Listeria monocytogenes EGD
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P0DQD2 (Residues: 322-392; Coverage: 12%)
Gene names: inlB, lmo0434
Sequence domains: Listeria-Bacteroides repeat domain (List_Bact_rpt)
Structure domains: Listeria-Bacteroides repeat domain

Ligands and Environments

2 bound ligands:
Ligand CA 8 x CA
Ligand CL 3 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X11, EMBL/DESY, HAMBURG BEAMLINE X12
Spacegroup: P212121
Unit cell:
a: 28.61Å b: 58.34Å c: 158.07Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.158 0.157 0.196
Expression system: Escherichia coli BL21

Quick links

Citations

3 review citations

Entry of Listeria monocytogenes in mammalian epithelial cells: an updated view.
Pizarro-Cerdá et al. (2012)
2 more

3 mentions without citation

Fold and function of the InlB B-repeat.
Ebbes et al. (2011)
2 more