› 2ygi

X-ray diffraction
0.8Å resolution

Methanobactin HM1

Released:
DOI: 10.2210/pdb2ygi/pdb
PDB entry 2ygi coloured by chain, front view.
PDB entry 2ygi coloured by chain, side view.
PDB entry 2ygi coloured by chain, top view.
Source organism: Methylocystis hirsuta
Primary publication:
Variations in methanobactin structure influences copper utilization by methane-oxidizing bacteria.
El Ghazouani A, Baslé A, Gray J, Graham DW, Firbank SJ, Dennison C
Proc Natl Acad Sci U S A 109 8400-4 (2012)
PMID: 22582172

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-163361 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
METHANOBACTIN HM1 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 6 amino acids
Theoretical weight: 827 Da
Source organism: Methylocystis hirsuta

Ligands and Environments

1 bound ligand:
Ligand CU 4 x CU
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P1
Unit cell:
a: 9.072Å b: 22.535Å c: 23.572Å
α: 64.79° β: 86.06° γ: 91.77°
R-values:
R R work R free
0.076 not available 0.089

Quick links

Citations

11 review citations

Methanobactin and the Link between Copper and Bacterial Methane Oxidation.
DiSpirito et al. (2016)
10 more

2 mentions without citation

Bacterial copper storage proteins.
Dennison et al. (2018)
1 more