› 2yip

X-ray diffraction
2.14Å resolution

Crystal Structure of Parasite Sarcocystis muris Microneme Protein SML- 2 in complex with 1-Thio-beta-D-Galactose (SPACEGROUP P212121)

Released:
DOI: 10.2210/pdb2yip/pdb
PDB entry 2yip coloured by chain, front view.
PDB entry 2yip coloured by chain, side view.
PDB entry 2yip coloured by chain, top view.
Source organism: Sarcocystis muris
Primary publication:
PAN-modular structure of microneme protein SML-2 from the parasite Sarcocystis muris at 1.95 Å resolution and its complex with 1-thio-β-D-galactose.
Müller JJ, Weiss MS, Heinemann U
Acta Crystallogr D Biol Crystallogr 67 936-44 (2011)
PMID: 22101820

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-160554 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Microneme antigen L2 Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 138 amino acids
Theoretical weight: 15.09 KDa
Source organism: Sarcocystis muris
UniProt:
  • Canonical: P81860 (Residues: 1-138; Coverage: 100%)
Sequence domains:
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand YIO 6 x YIO
Ligand CL 13 x CL
Ligand GOL 7 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE BW7B
Spacegroup: P212121
Unit cell:
a: 53.31Å b: 130Å c: 158.85Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.161 0.159 0.202

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Citations

3 citation in other articles

Discovery of Novel Plant Interaction Determinants from the Genomes of 163 Root Nodule Bacteria.
Seshadri et al. (2015)
2 more