› 2yv5

X-ray diffraction
1.9Å resolution

Crystal structure of Yjeq from Aquifex aeolicus

Released:
DOI: 10.2210/pdb2yv5/pdb
PDB entry 2yv5 coloured by chain, front view.
PDB entry 2yv5 coloured by chain, side view.
PDB entry 2yv5 coloured by chain, top view.
Source organism: Aquifex aeolicus
Entry authors: Wang H, Kaminishi T, Hanawa-Suetsugu K, Takemoto C, Terada T, Shirouzu M, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130343 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Small ribosomal subunit biogenesis GTPase RsgA Chain: A
Molecule details ›
Chain: A
Length: 302 amino acids
Theoretical weight: 34.8 KDa
Source organism: Aquifex aeolicus
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: O66555 (Residues: 1-302; Coverage: 100%)
Gene names: aq_168, rsgA
Sequence domains: RsgA GTPase
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand ZN 1 x ZN
Ligand CL 1 x CL
Ligand GDP 1 x GDP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE AR-NW12A
Spacegroup: P43212
Unit cell:
a: 63.139Å b: 63.139Å c: 157.319Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.176 0.176 0.207
Expression system: Escherichia coli BL21

Quick links