› 2yvt

X-ray diffraction
1.6Å resolution

Crystal structure of aq_1956

Released:
DOI: 10.2210/pdb2yvt/pdb
PDB entry 2yvt coloured by chain, front view.
PDB entry 2yvt coloured by chain, side view.
PDB entry 2yvt coloured by chain, top view.
Source organism: Aquifex aeolicus VF5
Entry authors: Ishii R, Bessho Y, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130541 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Metallophosphoesterase TT1561-like domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 260 amino acids
Theoretical weight: 30.02 KDa
Source organism: Aquifex aeolicus VF5
Expression system: Escherichia coli
UniProt:
  • Canonical: O67769 (Residues: 1-260; Coverage: 100%)
Gene name: aq_1956
Sequence domains: Metallophosphoesterase, calcineurin superfamily
Structure domains: Purple Acid Phosphatase; chain A, domain 2

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 1 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B2
Spacegroup: P3121
Unit cell:
a: 72.733Å b: 72.733Å c: 90.873Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.171 0.17 0.202
Expression system: Escherichia coli

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