› 2ywa

X-ray diffraction
3.2Å resolution

Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8

Released:
DOI: 10.2210/pdb2ywa/pdb
PDB entry 2ywa coloured by chain, front view.
PDB entry 2ywa coloured by chain, side view.
PDB entry 2ywa coloured by chain, top view.
Source organism: Thermus thermophilus HB8
Entry authors: Kitamura Y, Yokoyama S, Kuramitsu S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-178255 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nucleotidyltransferase Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 119 amino acids
Theoretical weight: 14.05 KDa
Source organism: Thermus thermophilus HB8
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5SM95 (Residues: 1-119; Coverage: 100%)
Gene name: TTHA0048
Sequence domains: Nucleotidyltransferase substrate binding protein like
Structure domains: Nucleotidyltransferases domain 2

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 8 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B2
Spacegroup: P6122
Unit cell:
a: 121.76Å b: 121.76Å c: 322.56Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.216 0.216 0.243
Expression system: Escherichia coli

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