› 2yy0

X-ray diffraction
2.4Å resolution

Crystal Structure of MS0802, c-Myc-1 binding protein domain from Homo sapiens

Released:
DOI: 10.2210/pdb2yy0/pdb
PDB entry 2yy0 coloured by chain, front view.
PDB entry 2yy0 coloured by chain, side view.
PDB entry 2yy0 coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Xie Y, Wang H, Ihsanawati, Kishishita S, Takemoto C, Shirozu M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assemblies composition:
homo dimer (preferred)
homo dodecamer
Assembly name:
PDBe Complex ID:
PDB-CPX-189194 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
c-Myc-binding protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 53 amino acids
Theoretical weight: 6.12 KDa
Source organism: Homo sapiens
Expression system: cell free protein synthesis
UniProt:
  • Canonical: Q99417 (Residues: 42-94; Coverage: 52%)
Gene names: AMY1, MYCBP
Structure domains: Single alpha-helices involved in coiled-coils or other helix-helix interfaces

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE AR-NW12A
Spacegroup: R3
Unit cell:
a: 59.634Å b: 59.634Å c: 194.868Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.244 0.244 0.289
Expression system: cell free protein synthesis

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