› 2yyb

X-ray diffraction
2.6Å resolution

Crystal structure of TTHA1606 from Thermus thermophilus HB8

Released:
DOI: 10.2210/pdb2yyb/pdb
PDB entry 2yyb coloured by chain, front view.
PDB entry 2yyb coloured by chain, side view.
PDB entry 2yyb coloured by chain, top view.
Source organism: Thermus thermophilus HB8
Primary publication:
Crystal structure of the conserved hypothetical protein TTHA1606 from Thermus thermophilus HB8.
Tomoike F, Wakamatsu T, Nakagawa N, Kuramitsu S, Masui R
Proteins 76 244-8 (2009)
PMID: 19322824

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assemblies composition:
homo hexamer
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177915 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nif3-like dinuclear metal center hexameric protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 242 amino acids
Theoretical weight: 26.87 KDa
Source organism: Thermus thermophilus HB8
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q5SHX4 (Residues: 1-242; Coverage: 100%)
Gene name: TTHA1606
Sequence domains: Duf34/NIF3 (NGG1p interacting factor 3)
Structure domains: NIF3 (NGG1p interacting factor 3)-like

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B2
Spacegroup: R32
Unit cell:
a: 148.186Å b: 148.186Å c: 196.395Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.239 0.239 0.283
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

5 citation in other articles

Multiple regulatory mechanisms control the expression of the Geobacillus stearothermophilus gene for extracellular xylanase.
Shulami et al. (2014)
4 more

3 mentions without citation

The Nif3-Family Protein YqfO03 from Pseudomonas syringae MB03 Has Multiple Nematicidal Activities against Caenorhabditis elegans and Meloidogyne incognita.
Manan et al. (2018)
2 more