› 2yzw

X-ray diffraction
1.7Å resolution

ADP-ribosylglycohydrolase-related protein complex

Released:
DOI: 10.2210/pdb2yzw/pdb
PDB entry 2yzw coloured by chain, front view.
PDB entry 2yzw coloured by chain, side view.
PDB entry 2yzw coloured by chain, top view.
Source organism: Thermus thermophilus HB8
Entry authors: Ebihara A, Manzoku M, Yokoyama S, Kuramitsu S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-178269 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
ADP-ribosylglycohydrolase Chain: A
Molecule details ›
Chain: A
Length: 303 amino acids
Theoretical weight: 32.96 KDa
Source organism: Thermus thermophilus HB8
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5SMG9 (Residues: 1-303; Coverage: 100%)
Gene name: TTHA1059
Sequence domains: ADP-ribosylglycohydrolase
Structure domains: ADP-ribosylation/Crystallin J1

Ligands and Environments

1 bound ligand:
Ligand GD3 2 x GD3
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B2
Spacegroup: P212121
Unit cell:
a: 44.147Å b: 73.95Å c: 78.606Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.186 0.186 0.214
Expression system: Escherichia coli

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