› 344d

X-ray diffraction
1.46Å resolution

DETERMINATION BY MAD-DM OF THE STRUCTURE OF THE DNA DUPLEX D(ACGTACG(5-BRU))2 AT 1.46A AND 100K

Released:
DOI: 10.2210/pdb344d/pdb
PDB entry 344d coloured by chain, front view.
PDB entry 344d coloured by chain, side view.
PDB entry 344d coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Determination by MAD-DM of the structure of the DNA duplex d[ACGTACG(5-BrU)]2 at 1.46 A and 100 K.
Todd AK, Adams A, Powell HR, Wilcock DJ, Thorpe JH, Lausi A, Zanini F, Wakelin LP, Cardin CJ
Acta Crystallogr D Biol Crystallogr 55 729-35 (1999)
PMID: 10089302

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-116015 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*(BRU))-3') Chain: A
Molecule details ›
Chain: A
Length: 8 nucleotides
Theoretical weight: 2.49 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
1 modified residue:
Ligand BRU 1 x BRU

Experiments and Validation Details

Entry percentile scores
X-ray source: ELETTRA BEAMLINE 5.2R
Spacegroup: P43212
Unit cell:
a: 43.597Å b: 43.597Å c: 26.268Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.112 not available not available
Expression system: Not provided

Quick links

Citations

1 review citation

Crystallographic studies of DNA and RNA.
Mooers BH. (2009)
1 other article

2 mentions without citation

DNA conformations and their sequence preferences.
Svozil et al. (2008)
1 more