› 372d

X-ray diffraction
2.6Å resolution

STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG)

Released:
DOI: 10.2210/pdb372d/pdb
PDB entry 372d coloured by chain, front view.
PDB entry 372d coloured by chain, side view.
PDB entry 372d coloured by chain, top view.
Source organism: synthetic construct
Primary publication:
Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)
Fernandez LG, Subirana JA, Verdaguer N, Pyshnyi D, Campos L, Malinina L
J Biomol Struct Dyn 15 151-63 (1997)
PMID: 9283988

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-116034 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') Chain: A
Molecule details ›
Chain: A
Length: 8 nucleotides
Theoretical weight: 2.43 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ELLIOTT GX-21
Spacegroup: P43212
Unit cell:
a: 41.77Å b: 41.77Å c: 25.15Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.184 0.181 0.21
Expression system: Not provided

Quick links

Citations

1 review citation

Hybrid, multiplexed, functional DNA nanotechnology for bioanalysis.
Wang et al. (2015)
5 other articles

1 mention without citation

Phosphorylation of a membrane curvature-sensing motif switches function of the HOPS subunit Vps41 in membrane tethering.
Cabrera et al. (2010)