› 387d

X-ray diffraction
3.1Å resolution

RNA Pseudoknot with 3D Domain Swapping

Released:
DOI: 10.2210/pdb387d/pdb
PDB entry 387d coloured by chain, front view.
PDB entry 387d coloured by chain, side view.
PDB entry 387d coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
The Structure of an RNA Pseudoknot Shows 3D Domain Swapping
Lietzke SE, Barnes CL, Malone VF, Jones JT, Kundrot CE
Structure, Motion, Interaction and Expression of Biological Macromolecules, The Proceedings of the Tenth Conversation held at The University-SUNY, Albany NY, June 17-21, 1997 10 91-101 (1998)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196622 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
RNA Pseudoknot Chain: A
Molecule details ›
Chain: A
Length: 26 nucleotides
Theoretical weight: 8.39 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU200
Spacegroup: P4322
Unit cell:
a: 61.6Å b: 61.6Å c: 98.9Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.181 0.181 0.234
Expression system: Not provided

Quick links

Citations

2 mentions without citation

Computational approaches to 3D modeling of RNA.
Laing et al. (2010)
1 more