3axg

X-ray diffraction
2Å resolution

Structure of 6-aminohexanoate-oligomer hydrolase

Released:

Function and Biology Details

Reaction catalysed:
(N-(6-aminohexanoyl))(n) + H(2)O = (N-(6-aminohexanoyl))(n-x) + (N-(6-aminohexanoyl))(x)
Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
PDBe Complex ID:
PDB-CPX-172824 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
6-aminohexanoate-oligomer endohydrolase Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O
Length: 355 amino acids
Theoretical weight: 36.93 KDa
Source organism: Agromyces sp. KY5R
Expression system: Escherichia coli
UniProt:
  • Canonical: Q1EPR5 (Residues: 1-355; Coverage: 100%)
Gene name: nylC
Sequence domains: Peptidase family S58
Structure domains: L-amino peptidase D-ALA esterase/amidase

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL38B1
Spacegroup: I222
Unit cell:
a: 155.863Å b: 214.446Å c: 478.804Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.211 0.211 0.24
Expression system: Escherichia coli