› 3b9z

X-ray diffraction
1.85Å resolution

Crystal structure of the Nitrosomonas europaea Rh protein complexed with carbon dioxide

Released:
DOI: 10.2210/pdb3b9z/pdb
PDB entry 3b9z coloured by chain, front view.
PDB entry 3b9z coloured by chain, side view.
PDB entry 3b9z coloured by chain, top view.
Source organism: Nitrosomonas europaea ATCC 19718
Primary publication:
Structure of the Nitrosomonas europaea Rh protein.
Li X, Jayachandran S, Nguyen HH, Chan MK
Proc Natl Acad Sci U S A 104 19279-84 (2007)
PMID: 18040042

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-182715 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Ammonium transporter AmtB-like domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 388 amino acids
Theoretical weight: 40.78 KDa
Source organism: Nitrosomonas europaea ATCC 19718
Expression system: Methylococcus capsulatus
UniProt:
  • Canonical: Q82X47 (Residues: 31-418; Coverage: 97%)
Gene names: NE0448, Rh50
Sequence domains: Ammonium Transporter Family
Structure domains: Ammonium transporter AmtB like domains

Ligands and Environments

3 bound ligands:
Ligand BOG 2 x BOG
Ligand CO2 1 x CO2
Ligand UNL 1 x UNL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-1
Spacegroup: R3
Unit cell:
a: 100.434Å b: 100.434Å c: 143.467Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.166 0.166 0.179
Expression system: Methylococcus capsulatus

Quick links

Citations

13 review citations

The ABCs of membrane transporters in health and disease (SLC series): introduction.
Hediger et al. (2013)
12 more

1 mention without citation

Seleno-detergent MAD phasing of leukotriene C4 synthase in complex with dodecyl-β-D-selenomaltoside.
Saino et al. (2011)