› 3bq4

X-ray diffraction
2.7Å resolution

Crystal Structure of Ad35 fiber knob

Released:
DOI: 10.2210/pdb3bq4/pdb
PDB entry 3bq4 coloured by chain, front view.
PDB entry 3bq4 coloured by chain, side view.
PDB entry 3bq4 coloured by chain, top view.
Source organism: Human adenovirus 35
Primary publication:
Conservation of fiber structure and CD46 usage by subgroup B2 adenoviruses.
Pache L, Venkataraman S, Nemerow GR, Reddy VS
Virology 375 573-9 (2008)
PMID: 18336857

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-182011 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Adenoviral fibre protein knob domain-containing protein Chains: A, B, D, E, F, G
Molecule details ›
Chains: A, B, D, E, F, G
Length: 220 amino acids
Theoretical weight: 24.14 KDa
Source organism: Human adenovirus 35
Expression system: Escherichia coli
UniProt:
  • Canonical: Q7T925 (Residues: 121-323; Coverage: 63%)
Gene name: L5
Sequence domains: Adenoviral fibre protein (knob domain)
Structure domains: Adenovirus pIV-related, attachment domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-D
Spacegroup: I4
Unit cell:
a: 173.906Å b: 173.906Å c: 154.145Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.332 0.332 0.352
Expression system: Escherichia coli

Quick links

Citations

6 review citations

Adenovirus.
Smith et al. (2010)
5 more

1 mention without citation

'Hot' macromolecular crystals.
Koclega et al. (2009)