› 3c8v

X-ray diffraction
2.28Å resolution

Crystal structure of putative acetyltransferase (YP_390128.1) from Desulfovibrio desulfuricans G20 at 2.28 A resolution

Released:
DOI: 10.2210/pdb3c8v/pdb
PDB entry 3c8v coloured by chain, front view.
PDB entry 3c8v coloured by chain, side view.
PDB entry 3c8v coloured by chain, top view.
Source organism: Oleidesulfovibrio alaskensis G20
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-174245 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Hexapeptide repeat-containing transferase Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 496 amino acids
Theoretical weight: 55.81 KDa
Source organism: Oleidesulfovibrio alaskensis G20
Expression system: Escherichia coli
UniProt:
  • Canonical: Q30V63 (Residues: 1-477; Coverage: 100%)
Gene name: Dde_3640
Sequence domains: Hexapeptide repeat including loop
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand CL 12 x CL
Ligand EDO 28 x EDO
Ligand MG 1 x MG
1 modified residue:
Ligand MSE 48 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.1
Spacegroup: R3
Unit cell:
a: 249.617Å b: 249.617Å c: 104.9Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.182 0.18 0.223
Expression system: Escherichia coli

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