› 3c9m

X-ray diffraction
3.4Å resolution

Structure of a mutant bovine rhodopsin in hexagonal crystal form

Released:
DOI: 10.2210/pdb3c9m/pdb
PDB entry 3c9m coloured by chain, front view.
PDB entry 3c9m coloured by chain, side view.
PDB entry 3c9m coloured by chain, top view.
Source organism: Bos taurus
Primary publication:
Alternative models for two crystal structures of bovine rhodopsin.
Stenkamp RE
Acta Crystallogr D Biol Crystallogr D64 902-4 (2008)
PMID: 18645239

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136065 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rhodopsin Chain: A
Molecule details ›
Chain: A
Length: 348 amino acids
Theoretical weight: 39.01 KDa
Source organism: Bos taurus
UniProt:
  • Canonical: P02699 (Residues: 1-348; Coverage: 100%)
Gene name: RHO
Sequence domains:
Structure domains: Rhodopsin 7-helix transmembrane proteins

Ligands and Environments

3 bound ligands:
Ligand NAG 1 x NAG
Ligand ACE 1 x ACE
Ligand RET 1 x RET
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P64
Unit cell:
a: 109.3Å b: 109.3Å c: 77.7Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.176 0.174 0.219

Quick links

Citations

10 review citations

The significance of G protein-coupled receptor crystallography for drug discovery.
Salon et al. (2011)
9 more

19 mentions without citation

Diversity and modularity of G protein-coupled receptor structures.
Katritch et al. (2012)
18 more