› 3cz6

X-ray diffraction
1.85Å resolution

Crystal Structure of the Rap1 C-terminus

Released:
DOI: 10.2210/pdb3cz6/pdb
PDB entry 3cz6 coloured by chain, front view.
PDB entry 3cz6 coloured by chain, side view.
PDB entry 3cz6 coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
Structural and functional studies of the Rap1 C-terminus reveal novel separation-of-function mutants.
Feeser EA, Wolberger C
J Mol Biol 380 520-31 (2008)
PMID: 18538788

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo dimer
Assembly name:
PDBe Complex ID:
PDB-CPX-145985 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DNA-binding protein RAP1 Chains: A, B
Molecule details ›
Chains: A, B
Length: 168 amino acids
Theoretical weight: 19.75 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P11938 (Residues: 672-827; Coverage: 19%)
Gene names: GRF1, N1310, RAP1, TUF1, YNL216W
Sequence domains: TRF2-interacting telomeric protein/Rap1 - C terminal domain
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand MPD 3 x MPD
Ligand MES 2 x MES
1 modified residue:
Ligand MSE 10 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-D
Spacegroup: P21
Unit cell:
a: 48.01Å b: 47.98Å c: 72.56Å
α: 90° β: 94.23° γ: 90°
R-values:
R R work R free
0.175 0.175 0.199
Expression system: Escherichia coli

Quick links

Citations

7 review citations

SIR proteins and the assembly of silent chromatin in budding yeast.
Kueng et al. (2013)
6 more

4 mentions without citation

Plasticity of telomere maintenance mechanisms in yeast.
Lue NF. (2010)
3 more