› 3d1p

X-ray diffraction
0.98Å resolution

Atomic resolution structure of uncharacterized protein from Saccharomyces cerevisiae

Released:
DOI: 10.2210/pdb3d1p/pdb
PDB entry 3d1p coloured by chain, front view.
PDB entry 3d1p coloured by chain, side view.
PDB entry 3d1p coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Entry authors: Nocek B, Evdokimova E, Kudritska M, Savchenko A, Edwards AM, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-171334 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Thiosulfate:glutathione sulfurtransferase Chain: A
Molecule details ›
Chain: A
Length: 139 amino acids
Theoretical weight: 15.62 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: Q12305 (Residues: 1-139; Coverage: 100%)
Gene names: RDL1, YOR285W
Sequence domains: Rhodanese-like domain
Structure domains: Rhodanese-like domain

Ligands and Environments

2 bound ligands:
Ligand CL 1 x CL
Ligand ACT 1 x ACT
1 modified residue:
Ligand MSE 4 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: C2
Unit cell:
a: 58.343Å b: 37.429Å c: 52.198Å
α: 90° β: 108.86° γ: 90°
R-values:
R R work R free
0.109 0.108 0.124
Expression system: Escherichia coli

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