› 3d3n

X-ray diffraction
2.5Å resolution

Crystal structure of lipase/esterase (lp_2923) from Lactobacillus plantarum. Northeast Structural Genomics Consortium target LpR108

Released:
DOI: 10.2210/pdb3d3n/pdb
PDB entry 3d3n coloured by chain, front view.
PDB entry 3d3n coloured by chain, side view.
PDB entry 3d3n coloured by chain, top view.
Source organism: Lactiplantibacillus plantarum WCFS1
Entry authors: Forouhar F, Su M, Seetharaman J, Mao L, Janjua H, Xiao R, Ciccosanti C, Maglaqui M, Foote EL, Zhao L, Everett JK, Acton TB, Montelione GT, Tong L, Hunt JF, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-123791 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
BD-FAE-like domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 284 amino acids
Theoretical weight: 31.8 KDa
Source organism: Lactiplantibacillus plantarum WCFS1
Expression system: Escherichia coli
UniProt:
  • Canonical: F9US10 (Residues: 1-276; Coverage: 100%)
Gene name: lp_2923
Sequence domains: BD-FAE
Structure domains: alpha/beta hydrolase

Ligands and Environments

2 bound ligands:
Ligand EPE 2 x EPE
Ligand CA 1 x CA
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4C
Spacegroup: P212121
Unit cell:
a: 66.074Å b: 93.022Å c: 95.765Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.217 0.216 0.263
Expression system: Escherichia coli

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