› 3d6i

X-ray diffraction
1.5Å resolution

Structure of the Thioredoxin-like Domain of Yeast Glutaredoxin 3

Released:
DOI: 10.2210/pdb3d6i/pdb
PDB entry 3d6i coloured by chain, front view.
PDB entry 3d6i coloured by chain, side view.
PDB entry 3d6i coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
Structure of the thioredoxin-like domain of yeast glutaredoxin 3.
Gibson LM, Dingra NN, Outten CE, Lebioda L
Acta Crystallogr D Biol Crystallogr 64 927-32 (2008)
PMID: 18703840

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-169951 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Monothiol glutaredoxin-3 Chains: A, B
Molecule details ›
Chains: A, B
Length: 112 amino acids
Theoretical weight: 12.57 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: Q03835 (Residues: 2-113; Coverage: 45%)
Gene names: GRX3, YD8557.05C, YDR098C
Sequence domains: Thioredoxin
Structure domains: Glutaredoxin

Ligands and Environments

1 bound ligand:
Ligand SO4 2 x SO4
1 modified residue:
Ligand CME 2 x CME

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: P21
Unit cell:
a: 47.906Å b: 48.611Å c: 55.294Å
α: 90° β: 116.76° γ: 90°
R-values:
R R work R free
0.225 0.223 0.249
Expression system: Escherichia coli

Quick links

Citations

8 citation in other articles

The yeast iron regulatory proteins Grx3/4 and Fra2 form heterodimeric complexes containing a [2Fe-2S] cluster with cysteinyl and histidyl ligation.
Li et al. (2009)
7 more

2 mentions without citation

Structure of Arabidopsis chloroplastic monothiol glutaredoxin AtGRXcp.
Li et al. (2010)
1 more