› 3d9r

X-ray diffraction
2.4Å resolution

Crystal structure of ketosteroid isomerase-like protein (YP_049581.1) from ERWINIA CAROTOVORA ATROSEPTICA SCRI1043 at 2.40 A resolution

Released:
DOI: 10.2210/pdb3d9r/pdb
PDB entry 3d9r coloured by chain, front view.
PDB entry 3d9r coloured by chain, side view.
PDB entry 3d9r coloured by chain, top view.
Source organism: Pectobacterium atrosepticum
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-179503 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
SnoaL-like domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 135 amino acids
Theoretical weight: 14.68 KDa
Source organism: Pectobacterium atrosepticum
Expression system: Escherichia coli
UniProt:
  • Canonical: Q6D750 (Residues: 1-134; Coverage: 100%)
Gene name: ECA1476
Sequence domains: SnoaL-like domain
Structure domains: Nuclear Transport Factor 2; Chain: A,

Ligands and Environments

3 bound ligands:
Ligand NA 1 x NA
Ligand UNL 4 x UNL
Ligand GOL 4 x GOL
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: C2221
Unit cell:
a: 115.998Å b: 135.416Å c: 139.164Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.184 0.182 0.219
Expression system: Escherichia coli

Quick links