› 3dao

X-ray diffraction
1.8Å resolution

CRYSTAL STRUCTURE OF A PUTATIVE PHOSPHATE (EUBREC_1417) FROM EUBACTERIUM RECTALE AT 1.80 A RESOLUTION

Released:
DOI: 10.2210/pdb3dao/pdb
PDB entry 3dao coloured by chain, front view.
PDB entry 3dao coloured by chain, side view.
PDB entry 3dao coloured by chain, top view.
Source organism: [Eubacterium] rectale ATCC 33656
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-112100 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
HAD-superfamily hydrolase, subfamily IIB Chains: A, B
Molecule details ›
Chains: A, B
Length: 283 amino acids
Theoretical weight: 32.52 KDa
Source organism: [Eubacterium] rectale ATCC 33656
Expression system: Escherichia coli
UniProt:
  • Canonical: D0VWU2 (Residues: 1-264; Coverage: 100%)
Gene names: DW038_05095, DW753_06600, DW967_01240, DWV78_02180, DWY38_05505, FYL37_02255, LD38_07660, RER070207001050
Sequence domains: haloacid dehalogenase-like hydrolase
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand 1PE 1 x 1PE
Ligand CIT 1 x CIT
1 modified residue:
Ligand MSE 16 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P41212
Unit cell:
a: 101.855Å b: 101.855Å c: 110.994Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.17 0.168 0.208
Expression system: Escherichia coli

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