› 3dex

X-ray diffraction
2.7Å resolution

Crystal structure of SAV_2001 protein from Streptomyces avermitilis, Northeast Structural Genomics Consortium Target SvR107.

Released:
DOI: 10.2210/pdb3dex/pdb
PDB entry 3dex coloured by chain, front view.
PDB entry 3dex coloured by chain, side view.
PDB entry 3dex coloured by chain, top view.
Source organism: Streptomyces avermitilis
Entry authors: Forouhar F, Neely H, Seetharaman J, Janjua H, Fang Y, Xiao R, Cunningham K, Ma L-C, Owen LA, Chen CX, Acton TB, Montelione GT, Hunt JF, Tong L, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-182669 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Selenoprotein W-related protein Chains: A, B, C, D, E, F, G, H
Molecule details ›
Chains: A, B, C, D, E, F, G, H
Length: 107 amino acids
Theoretical weight: 12.44 KDa
Source organism: Streptomyces avermitilis
Expression system: Escherichia coli
UniProt:
  • Canonical: Q82LK9 (Residues: 1-99; Coverage: 100%)
Gene name: SAVERM_2001
Sequence domains: Rdx family
Structure domains: Glutaredoxin

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4C
Spacegroup: P21
Unit cell:
a: 48.126Å b: 158.318Å c: 48.088Å
α: 90° β: 90.62° γ: 90°
R-values:
R R work R free
0.23 0.23 0.264
Expression system: Escherichia coli

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