› 3dkz

X-ray diffraction
2.4Å resolution

Crystal structure of the Q7W9W5_BORPA protein from Bordetella parapertussis. Northeast Structural Genomics Consortium target BpR208C.

Released:
DOI: 10.2210/pdb3dkz/pdb
PDB entry 3dkz coloured by chain, front view.
PDB entry 3dkz coloured by chain, side view.
PDB entry 3dkz coloured by chain, top view.
Source organism: Bordetella parapertussis
Entry authors: Vorobiev SM, Su M, Seetharaman J, Wang D, Ciccosanti C, Foote EL, Mao L, Xiao R, Acton TB, Montelione GT, Hunt JF, Tong L, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-182115 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Thioesterase domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 142 amino acids
Theoretical weight: 15.58 KDa
Source organism: Bordetella parapertussis
Expression system: Escherichia coli
UniProt:
  • Canonical: Q7W9W5 (Residues: 34-167; Coverage: 79%)
Gene name: BPP1634
Sequence domains: Thioesterase superfamily
Structure domains: Hotdog Thioesterase

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 10 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4C
Spacegroup: P3121
Unit cell:
a: 69.646Å b: 69.646Å c: 107.792Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.238 0.238 0.26
Expression system: Escherichia coli

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