› 3dnp

X-ray diffraction
1.85Å resolution

Crystal structure of Stress response protein yhaX from Bacillus subtilis

Released:
DOI: 10.2210/pdb3dnp/pdb
PDB entry 3dnp coloured by chain, front view.
PDB entry 3dnp coloured by chain, side view.
PDB entry 3dnp coloured by chain, top view.
Source organism: Bacillus subtilis
Entry authors: Chang C, Tesar C, Jedrzejczak R, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-126593 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Stress response protein YhaX Chain: A
Molecule details ›
Chain: A
Length: 290 amino acids
Theoretical weight: 33.05 KDa
Source organism: Bacillus subtilis
Expression system: Escherichia coli
UniProt:
  • Canonical: O07539 (Residues: 1-287; Coverage: 100%)
Gene names: BSU09830, yhaX
Sequence domains: haloacid dehalogenase-like hydrolase
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand MG 1 x MG
Ligand EDO 1 x EDO
1 modified residue:
Ligand MSE 9 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P43212
Unit cell:
a: 63.939Å b: 63.939Å c: 161.485Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.169 0.167 0.207
Expression system: Escherichia coli

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