› 3dnx

X-ray diffraction
1.94Å resolution

SPO1766 protein of unknown function from Silicibacter pomeroyi.

Released:
DOI: 10.2210/pdb3dnx/pdb
PDB entry 3dnx coloured by chain, front view.
PDB entry 3dnx coloured by chain, side view.
PDB entry 3dnx coloured by chain, top view.
Source organism: Ruegeria pomeroyi
Entry authors: Osipiuk J, Mulligan R, Clancy S, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177558 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DNA repair protein MmcB-related protein Chain: A
Molecule details ›
Chain: A
Length: 153 amino acids
Theoretical weight: 17.5 KDa
Source organism: Ruegeria pomeroyi
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5LSK1 (Residues: 1-150; Coverage: 100%)
Gene name: SPO1766
Sequence domains: DNA repair protein MmcB-like

Ligands and Environments

1 bound ligand:
Ligand NA 2 x NA
1 modified residue:
Ligand MSE 5 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P4122
Unit cell:
a: 59.892Å b: 59.892Å c: 99.868Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.174 0.172 0.213
Expression system: Escherichia coli

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