› 3dr5

X-ray diffraction
2.25Å resolution

Crystal structure of the Q8NRD3_CORGL protein from Corynebacterium glutamicum. Northeast Structural Genomics Consortium target CgR117.

Released:
DOI: 10.2210/pdb3dr5/pdb
PDB entry 3dr5 coloured by chain, front view.
PDB entry 3dr5 coloured by chain, side view.
PDB entry 3dr5 coloured by chain, top view.
Source organism: Corynebacterium glutamicum
Entry authors: Vorobiev SM, Su M, Seetharaman J, Wang D, Ciccosanti C, Foote EL, Mao L, Xiao R, Acton TB, Montelione GT, Hunt JF, Tong L, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-185647 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Methyltransferase Chain: A
Molecule details ›
Chain: A
Length: 221 amino acids
Theoretical weight: 24.01 KDa
Source organism: Corynebacterium glutamicum
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8NRD3 (Residues: 1-213; Coverage: 100%)
Gene name: Cgl1119
Sequence domains: O-methyltransferase
Structure domains: Vaccinia Virus protein VP39

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 4 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4A
Spacegroup: P6122
Unit cell:
a: 50.511Å b: 50.511Å c: 303.33Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.211 0.211 0.231
Expression system: Escherichia coli

Quick links