3dri

X-ray diffraction
1.8Å resolution

Crystal structure of Lactococcal OppA co-crystallized with an octamer peptide in an open conformation

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-106943 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Solute-binding protein family 5 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 590 amino acids
Theoretical weight: 65.14 KDa
Source organism: Lactococcus lactis subsp. cremoris MG1363
Expression system: Lactococcus lactis
UniProt:
  • Canonical: A2RJ53 (Residues: 24-600; Coverage: 99%)
Gene names: llmg_0701, oppA
Sequence domains: Bacterial extracellular solute-binding proteins, family 5 Middle
Structure domains: Dipeptide-binding Protein; Domain 3
peptide AASASA Chain: B
Molecule details ›
Chain: B
Length: 6 amino acids
Theoretical weight: 476 Da
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID14-2
Spacegroup: P21
Unit cell:
a: 39.669Å b: 123.224Å c: 59.604Å
α: 90° β: 101.9° γ: 90°
R-values:
R R work R free
0.164 0.161 0.203
Expression systems:
  • Lactococcus lactis
  • Not provided