› 3dxi

X-ray diffraction
2.04Å resolution

Crystal structure of the N-terminal domain of a putative aldolase (BVU_2661) from Bacteroides vulgatus

Released:
DOI: 10.2210/pdb3dxi/pdb
PDB entry 3dxi coloured by chain, front view.
PDB entry 3dxi coloured by chain, side view.
PDB entry 3dxi coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry authors: Eswaramoorthy S, Pabalan AA, Burley SK, Swaminathan S, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107888 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Pyruvate carboxyltransferase domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 320 amino acids
Theoretical weight: 37.11 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli
UniProt:
  • Canonical: A6L3P9 (Residues: 2-310; Coverage: 61%)
Gene name: BVU_2661
Sequence domains: HMGL-like
Structure domains: Aldolase class I

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 30 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X12C
Spacegroup: P212121
Unit cell:
a: 57.258Å b: 65.639Å c: 177.835Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.223 0.196 0.232
Expression system: Escherichia coli

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