› 3dzz

X-ray diffraction
1.61Å resolution

CRYSTAL STRUCTURE OF A PUTATIVE PLP-DEPENDENT AMINOTRANSFERASE (LBUL_1103) FROM LACTOBACILLUS DELBRUECKII SUBSP. AT 1.61 A RESOLUTION

Released:
DOI: 10.2210/pdb3dzz/pdb
PDB entry 3dzz coloured by chain, front view.
PDB entry 3dzz coloured by chain, side view.
PDB entry 3dzz coloured by chain, top view.
Source organism: Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-163498 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
putative pyridoxal 5'-phosphate-dependent C-S lyase Chains: A, B
Molecule details ›
Chains: A, B
Length: 391 amino acids
Theoretical weight: 44.84 KDa
Source organism: Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Expression system: Escherichia coli
Structure domains:

Ligands and Environments

5 bound ligands:
Ligand CA 2 x CA
Ligand CL 2 x CL
Ligand ACT 2 x ACT
Ligand PEG 5 x PEG
Ligand PG4 1 x PG4
2 modified residues:
Ligand MSE 22 x MSE
Ligand LLP 2 x LLP

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: C2
Unit cell:
a: 115.8Å b: 94.8Å c: 84.602Å
α: 90° β: 127.13° γ: 90°
R-values:
R R work R free
0.146 0.144 0.175
Expression system: Escherichia coli

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