› 3e38

X-ray diffraction
2.2Å resolution

CRYSTAL STRUCTURE OF A TWO-DOMAIN PROTEIN CONTAINING PREDICTED PHP-LIKE METAL-DEPENDENT PHOSPHOESTERASE (BVU_3505) FROM BACTEROIDES VULGATUS ATCC 8482 AT 2.20 A RESOLUTION

Released:
DOI: 10.2210/pdb3e38/pdb
PDB entry 3e38 coloured by chain, front view.
PDB entry 3e38 coloured by chain, side view.
PDB entry 3e38 coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107897 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Polymerase/histidinol phosphatase N-terminal domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 343 amino acids
Theoretical weight: 40.01 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli
UniProt:
  • Canonical: A6L615 (Residues: 22-363; Coverage: 94%)
Gene name: BVU_3505
Sequence domains: Ig-like domain
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand ZN 6 x ZN
Ligand CAC 2 x CAC
Ligand GOL 3 x GOL
1 modified residue:
Ligand MSE 16 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P21212
Unit cell:
a: 95.68Å b: 117.82Å c: 79.56Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.175 0.172 0.225
Expression system: Escherichia coli

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