› 3e3x

X-ray diffraction
1.95Å resolution

The C-terminal part of BipA protein from Vibrio parahaemolyticus RIMD 2210633

Released:
DOI: 10.2210/pdb3e3x/pdb
PDB entry 3e3x coloured by chain, front view.
PDB entry 3e3x coloured by chain, side view.
PDB entry 3e3x coloured by chain, top view.
Source organism: Vibrio parahaemolyticus
Entry authors: Nocek B, Mulligan R, Duggan E, Clancy S, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-192215 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Large ribosomal subunit assembly factor BipA Chain: A
Molecule details ›
Chain: A
Length: 332 amino acids
Theoretical weight: 37.42 KDa
Source organism: Vibrio parahaemolyticus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9L5X8 (Residues: 281-609; Coverage: 54%)
Gene names: FVP01_19300, HKB16_30330, HKB21_24935, I7278_13590, IB292_04855, M5598_15100, bipA, typA
Sequence domains:
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand EDO 2 x EDO
Ligand SO4 1 x SO4
3 modified residues:
Ligand MSE 11 x MSE
Ligand MLZ 2 x MLZ
Ligand MLY 6 x MLY

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: C2221
Unit cell:
a: 90.6Å b: 104.571Å c: 74.348Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.174 0.172 0.223
Expression system: Escherichia coli BL21(DE3)

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