› 3ef8

X-ray diffraction
1.5Å resolution

Crystal structure of Putative Scytalone Dehydratase (YP_496742.1) from NOVOSPHINGOBIUM AROMATICIVORANS DSM 12444 at 1.50 A resolution

Released:
DOI: 10.2210/pdb3ef8/pdb
PDB entry 3ef8 coloured by chain, front view.
PDB entry 3ef8 coloured by chain, side view.
PDB entry 3ef8 coloured by chain, top view.
Source organism: Novosphingobium aromaticivorans DSM 12444
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-173568 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
SnoaL-like domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 150 amino acids
Theoretical weight: 17.57 KDa
Source organism: Novosphingobium aromaticivorans DSM 12444
Expression system: Escherichia coli
UniProt:
  • Canonical: Q2G8B5 (Residues: 1-149; Coverage: 100%)
Gene name: Saro_1465
Sequence domains: SnoaL-like domain
Structure domains: Nuclear Transport Factor 2; Chain: A,

Ligands and Environments

4 bound ligands:
Ligand MG 1 x MG
Ligand PEG 5 x PEG
Ligand PGE 4 x PGE
Ligand PG4 4 x PG4
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: R3
Unit cell:
a: 59.851Å b: 59.851Å c: 237.504Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.164 0.163 0.188
Expression system: Escherichia coli

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