› 3ege

X-ray diffraction
2.4Å resolution

Crystal structure of Putative methyltransferase from antibiotic biosynthesis pathway (YP_324569.1) from ANABAENA VARIABILIS ATCC 29413 at 2.40 A resolution

Released:
DOI: 10.2210/pdb3ege/pdb
PDB entry 3ege coloured by chain, front view.
PDB entry 3ege coloured by chain, side view.
PDB entry 3ege coloured by chain, top view.
Source organism: Trichormus variabilis ATCC 29413
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-174747 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Methyltransferase type 11 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 261 amino acids
Theoretical weight: 29.88 KDa
Source organism: Trichormus variabilis ATCC 29413
Expression system: Escherichia coli
UniProt:
  • Canonical: Q3M5R2 (Residues: 1-260; Coverage: 100%)
Gene name: Ava_4070
Sequence domains: Methyltransferase domain
Structure domains: Vaccinia Virus protein VP39

Ligands and Environments

1 bound ligand:
Ligand EDO 1 x EDO
1 modified residue:
Ligand MSE 3 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P3121
Unit cell:
a: 76.609Å b: 76.609Å c: 134.815Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.184 0.182 0.202
Expression system: Escherichia coli

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