› 3er6

X-ray diffraction
1.9Å resolution

Crystal structure of a putative transcriptional regulator protein from Vibrio parahaemolyticus

Released:
DOI: 10.2210/pdb3er6/pdb
PDB entry 3er6 coloured by chain, front view.
PDB entry 3er6 coloured by chain, side view.
PDB entry 3er6 coloured by chain, top view.
Source organism: Vibrio parahaemolyticus
Entry authors: Bonanno JB, Freeman J, Bain KT, Chang S, Ozyurt S, Wasserman S, Sauder JM, Burley SK, Almo SC, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183318 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
HTH araC/xylS-type domain-containing protein Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 209 amino acids
Theoretical weight: 23.33 KDa
Source organism: Vibrio parahaemolyticus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q87I90 (Residues: 4-201; Coverage: 61%)
Gene name: VPA0716
Sequence domains: DJ-1/PfpI family
Structure domains: Rossmann fold

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CLSI BEAMLINE 08ID-1
Spacegroup: P31
Unit cell:
a: 105.268Å b: 105.268Å c: 101.745Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.194 0.192 0.231
Expression system: Escherichia coli

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