› 3f42

X-ray diffraction
1.78Å resolution

Crystal structure of uncharacterized protein HP0035 from Helicobacter pylori

Released:
DOI: 10.2210/pdb3f42/pdb
PDB entry 3f42 coloured by chain, front view.
PDB entry 3f42 coloured by chain, side view.
PDB entry 3f42 coloured by chain, top view.
Source organism: Helicobacter pylori
Entry authors: Chang C, Kudritska M, Savchenko A, Edwards A, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-127685 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nucleoid-associated protein HP_0035 Chains: A, B
Molecule details ›
Chains: A, B
Length: 99 amino acids
Theoretical weight: 11.21 KDa
Source organism: Helicobacter pylori
Expression system: Escherichia coli
UniProt:
  • Canonical: O24876 (Residues: 1-97; Coverage: 100%)
Gene name: HP_0035
Sequence domains: YbaB/EbfC DNA-binding family
Structure domains: Nucleoid-associated protein YbaB-like domain

Ligands and Environments

1 bound ligand:
Ligand EDO 4 x EDO
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: C2221
Unit cell:
a: 87.129Å b: 99.566Å c: 45.196Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.182 0.18 0.22
Expression system: Escherichia coli

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