› 3fcr

X-ray diffraction
1.8Å resolution

Crystal structure of putative aminotransferase (YP_614685.1) from SILICIBACTER SP. TM1040 at 1.80 A resolution

Released:
DOI: 10.2210/pdb3fcr/pdb
PDB entry 3fcr coloured by chain, front view.
PDB entry 3fcr coloured by chain, side view.
PDB entry 3fcr coloured by chain, top view.
Source organism: Ruegeria sp. TM1040
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-172836 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Aminotransferase Chain: A
Molecule details ›
Chain: A
Length: 458 amino acids
Theoretical weight: 50.38 KDa
Source organism: Ruegeria sp. TM1040
Expression system: Escherichia coli
UniProt:
  • Canonical: Q1GD43 (Residues: 1-457; Coverage: 100%)
Gene name: TM1040_2691
Sequence domains: Aminotransferase class-III
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand PLP 1 x PLP
Ligand EDO 5 x EDO
2 modified residues:
Ligand MSE 6 x MSE
Ligand LLP 1 x LLP

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-B
Spacegroup: C2
Unit cell:
a: 76.85Å b: 96.25Å c: 60.3Å
α: 90° β: 105.51° γ: 90°
R-values:
R R work R free
0.208 0.205 0.254
Expression system: Escherichia coli

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