› 3fd0

X-ray diffraction
2.12Å resolution

Crystal structure of putative cystathionine beta-lyase involved in aluminum resistance (NP_470671.1) from LISTERIA INNOCUA at 2.12 A resolution

Released:
DOI: 10.2210/pdb3fd0/pdb
PDB entry 3fd0 coloured by chain, front view.
PDB entry 3fd0 coloured by chain, side view.
PDB entry 3fd0 coloured by chain, top view.
Source organism: Listeria innocua
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-187851 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lin1335 protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 409 amino acids
Theoretical weight: 45.32 KDa
Source organism: Listeria innocua
Expression system: Escherichia coli
UniProt:
  • Canonical: Q92C56 (Residues: 1-408; Coverage: 100%)
Gene name: lin1335
Sequence domains: Methionine gamma-lyase
Structure domains:

Ligands and Environments

4 bound ligands:
Ligand CA 1 x CA
Ligand EDO 28 x EDO
Ligand PEG 3 x PEG
Ligand PGE 2 x PGE
2 modified residues:
Ligand MSE 16 x MSE
Ligand LLP 2 x LLP

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-B
Spacegroup: P3121
Unit cell:
a: 131.89Å b: 131.89Å c: 116.74Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.154 0.152 0.188
Expression system: Escherichia coli

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