› 3fj1

X-ray diffraction
1.75Å resolution

Crystal structure of putative phosphosugar isomerase (YP_167080.1) from SILICIBACTER POMEROYI DSS-3 at 1.75 A resolution

Released:
DOI: 10.2210/pdb3fj1/pdb
PDB entry 3fj1 coloured by chain, front view.
PDB entry 3fj1 coloured by chain, side view.
PDB entry 3fj1 coloured by chain, top view.
Source organism: Ruegeria pomeroyi DSS-3
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177556 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
SIS domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 344 amino acids
Theoretical weight: 36.46 KDa
Source organism: Ruegeria pomeroyi DSS-3
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5LSC5 (Residues: 1-343; Coverage: 100%)
Gene name: SPO1843
Sequence domains: SIS domain
Structure domains: Glucose-6-phosphate isomerase like protein; domain 1

Ligands and Environments

2 bound ligands:
Ligand CL 11 x CL
Ligand EDO 1 x EDO
1 modified residue:
Ligand MSE 24 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-B
Spacegroup: P212121
Unit cell:
a: 52.4Å b: 114.141Å c: 197.279Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.164 0.162 0.195
Expression system: Escherichia coli

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