› 3fyb

X-ray diffraction
1.8Å resolution

Crystal structure of a protein of unknown function (DUF1244) from Alcanivorax borkumensis

Released:
DOI: 10.2210/pdb3fyb/pdb
PDB entry 3fyb coloured by chain, front view.
PDB entry 3fyb coloured by chain, side view.
PDB entry 3fyb coloured by chain, top view.
Source organism: Alcanivorax borkumensis SK2
Entry authors: Singer AU, Evdokimova E, Kagan O, Edwards AM, Joachimiak A, Savchenko A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-171177 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
SMc04008-like domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 104 amino acids
Theoretical weight: 12.16 KDa
Source organism: Alcanivorax borkumensis SK2
Expression system: Escherichia coli
UniProt:
  • Canonical: Q0VSW0 (Residues: 1-103; Coverage: 100%)
Gene name: ABO_0290
Sequence domains: Protein of unknown function (DUF1244)
Structure domains: SMc04008-like

Ligands and Environments

4 bound ligands:
Ligand CL 3 x CL
Ligand CA 2 x CA
Ligand PEG 2 x PEG
Ligand EDO 1 x EDO
1 modified residue:
Ligand MSE 10 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU MICROMAX-007
Spacegroup: P212121
Unit cell:
a: 40.501Å b: 69.536Å c: 81.921Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.189 0.187 0.221
Expression system: Escherichia coli

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