› 3fzx

X-ray diffraction
2.22Å resolution

CRYSTAL STRUCTURE OF A PUTATIVE EXPORTED PROTEIN WITH YMCC-LIKE FOLD (BF2203) FROM BACTEROIDES FRAGILIS NCTC 9343 AT 2.22 A RESOLUTION

Released:
DOI: 10.2210/pdb3fzx/pdb
PDB entry 3fzx coloured by chain, front view.
PDB entry 3fzx coloured by chain, side view.
PDB entry 3fzx coloured by chain, top view.
Source organism: Bacteroides fragilis NCTC 9343
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177473 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF3108 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 218 amino acids
Theoretical weight: 25.2 KDa
Source organism: Bacteroides fragilis NCTC 9343
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5LD59 (Residues: 20-236; Coverage: 100%)
Gene name: BF9343_2170
Sequence domains: DUF3108-like
Structure domains: YmcC-like fold

Ligands and Environments

1 bound ligand:
Ligand CA 2 x CA
1 modified residue:
Ligand MSE 11 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P6422
Unit cell:
a: 143.74Å b: 143.74Å c: 49.46Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.202 0.2 0.25
Expression system: Escherichia coli

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