› 3g1g

X-ray diffraction
2.01Å resolution

Crystal structure of the C-terminal domain from the Rous Sarcoma Virus capsid protein: High pH

Released:
DOI: 10.2210/pdb3g1g/pdb
PDB entry 3g1g coloured by chain, front view.
PDB entry 3g1g coloured by chain, side view.
PDB entry 3g1g coloured by chain, top view.
Source organism: Rous sarcoma virus - Prague C
Primary publication:
Proton-linked dimerization of a retroviral capsid protein initiates capsid assembly.
Bailey GD, Hyun JK, Mitra AK, Kingston RL
Structure 17 737-48 (2009)
PMID: 19446529

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136798 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein p27, alternate cleaved 1 Chains: A, B
Molecule details ›
Chains: A, B
Length: 87 amino acids
Theoretical weight: 9.5 KDa
Source organism: Rous sarcoma virus - Prague C
Expression system: Escherichia coli
UniProt:
  • Canonical: P03322 (Residues: 390-476; Coverage: 12%)
Gene name: gag
Structure domains: Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.1
Spacegroup: P21212
Unit cell:
a: 46.6Å b: 72.2Å c: 48Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.219 0.217 0.257
Expression system: Escherichia coli

Quick links

Citations

3 review citations

Assembly and architecture of HIV.
Ganser-Pornillos et al. (2012)
2 more

3 mentions without citation

The Structure of Immature Virus-Like Rous Sarcoma Virus Gag Particles Reveals a Structural Role for the p10 Domain in Assembly.
Schur et al. (2015)
2 more