› 3g6s

X-ray diffraction
2.5Å resolution

Crystal structure of the endonuclease/exonuclease/phosphatase (BVU_0621) from Bacteroides vulgatus. Northeast Structural Genomics Consortium Target BvR56D

Released:
DOI: 10.2210/pdb3g6s/pdb
PDB entry 3g6s coloured by chain, front view.
PDB entry 3g6s coloured by chain, side view.
PDB entry 3g6s coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry authors: Forouhar F, Lew S, Seetharaman J, Xiao R, Sahdev S, Foote EL, Ciccosanti C, Wang D, Everett JK, Nair R, Acton TB, Rost B, Montelione GT, Hunt JF, Tong L, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107853 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Endonuclease/exonuclease/phosphatase domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 267 amino acids
Theoretical weight: 30.88 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli
UniProt:
  • Canonical: A6KY15 (Residues: 22-280; Coverage: 92%)
Gene name: BVU_0621
Sequence domains: Endonuclease/Exonuclease/phosphatase family
Structure domains: Endonuclease/exonuclease/phosphatase

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 5 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4C
Spacegroup: P41
Unit cell:
a: 75.601Å b: 75.601Å c: 66.715Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.182 0.18 0.234
Expression system: Escherichia coli

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