› 3gbh

X-ray diffraction
2Å resolution

CRYSTAL STRUCTURE OF A PUTATIVE NAD(P)H:FMN OXIDOREDUCTASE (SE1966) FROM STAPHYLOCOCCUS EPIDERMIDIS ATCC 12228 AT 2.00 A RESOLUTION

Released:
DOI: 10.2210/pdb3gbh/pdb
PDB entry 3gbh coloured by chain, front view.
PDB entry 3gbh coloured by chain, side view.
PDB entry 3gbh coloured by chain, top view.
Source organism: Staphylococcus epidermidis ATCC 12228
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-101569 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nitroreductase domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 213 amino acids
Theoretical weight: 24.78 KDa
Source organism: Staphylococcus epidermidis ATCC 12228
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A0H2VHN8 (Residues: 1-212; Coverage: 100%)
Gene name: SE_1966
Sequence domains: Nitroreductase family
Structure domains: NADH Oxidase

Ligands and Environments

5 bound ligands:
Ligand FMN 4 x FMN
Ligand UNL 4 x UNL
Ligand GOL 6 x GOL
Ligand PGE 2 x PGE
Ligand CA 5 x CA
1 modified residue:
Ligand MSE 40 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P212121
Unit cell:
a: 61.85Å b: 86.15Å c: 160.9Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.148 0.146 0.185
Expression system: Escherichia coli

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