› 3gfg

X-ray diffraction
2.59Å resolution

Structure of putative oxidoreductase yvaA from Bacillus subtilis in triclinic form

Released:
DOI: 10.2210/pdb3gfg/pdb
PDB entry 3gfg coloured by chain, front view.
PDB entry 3gfg coloured by chain, side view.
PDB entry 3gfg coloured by chain, top view.
Source organism: Bacillus subtilis subsp. subtilis str. 168
Entry authors: Ramagopal UA, Toro R, Gilmore M, Chang S, Burley SK, Almo SC, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Reaction catalysed: 
Scyllo-inositol + NADP(+) = 2,4,6/3,5-pentahydroxycyclohexanone + NADPH
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-128438 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
scyllo-inositol 2-dehydrogenase (NADP(+)) IolW Chains: A, B, C, D, E, F, G, H, I, J, K, L
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J, K, L
Length: 367 amino acids
Theoretical weight: 41.27 KDa
Source organism: Bacillus subtilis subsp. subtilis str. 168
Expression system: Escherichia coli
UniProt:
  • Canonical: O32223 (Residues: 3-358; Coverage: 99%)
Gene names: BSU33530, iolW, yvaA
Sequence domains:
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-C
Spacegroup: P1
Unit cell:
a: 72.931Å b: 92.135Å c: 187.589Å
α: 95.31° β: 94.19° γ: 95.21°
R-values:
R R work R free
0.185 0.182 0.236
Expression system: Escherichia coli

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