› 3gjy

X-ray diffraction
1.47Å resolution

Crystal structure of a probable spermidine synthase from Corynebacterium glutamicum ATCC 13032

Released:
DOI: 10.2210/pdb3gjy/pdb
PDB entry 3gjy coloured by chain, front view.
PDB entry 3gjy coloured by chain, side view.
PDB entry 3gjy coloured by chain, top view.
Source organism: Corynebacterium glutamicum ATCC 13032
Entry authors: Tan K, Li H, Freeman L, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-185644 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Spermidine synthase Chain: A
Molecule details ›
Chain: A
Length: 317 amino acids
Theoretical weight: 35.22 KDa
Source organism: Corynebacterium glutamicum ATCC 13032
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8NR27 (Residues: 1-314; Coverage: 100%)
Gene name: Cgl1237
Structure domains: Vaccinia Virus protein VP39

Ligands and Environments

1 bound ligand:
Ligand FMT 1 x FMT
1 modified residue:
Ligand MSE 9 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P212121
Unit cell:
a: 52.909Å b: 65.009Å c: 87.308Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.159 0.157 0.192
Expression system: Escherichia coli

Quick links