› 3glv

X-ray diffraction
1.99Å resolution

Crystal structure of the lipopolysaccharide core biosynthesis protein from Thermoplasma volcanium GSS1

Released:
DOI: 10.2210/pdb3glv/pdb
PDB entry 3glv coloured by chain, front view.
PDB entry 3glv coloured by chain, side view.
PDB entry 3glv coloured by chain, top view.
Source organism: Thermoplasma volcanium GSS1
Entry authors: Zhang R, Sather A, Clancy S, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Reaction catalysed: 
ATP + FMN = diphosphate + FAD
Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-188867 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
FAD synthase Chains: A, B
Molecule details ›
Chains: A, B
Length: 143 amino acids
Theoretical weight: 16.09 KDa
Source organism: Thermoplasma volcanium GSS1
Expression system: Escherichia coli
UniProt:
  • Canonical: Q979C2 (Residues: 1-142; Coverage: 100%)
Gene names: TV1239, TVG1279046, ribL
Sequence domains: Cytidylyltransferase-like
Structure domains: HUPs

Ligands and Environments

2 bound ligands:
Ligand SO4 2 x SO4
Ligand AMP 1 x AMP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P212121
Unit cell:
a: 62.391Å b: 67.187Å c: 99.032Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.197 0.195 0.242
Expression system: Escherichia coli

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